8ERB
Crystal structure of Fub7 in complex with vinylglycine ketimine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-01-28 |
Detector | RAYONIX MX-325 |
Wavelength(s) | 1.1950 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 146.703, 193.364, 149.913 |
Unit cell angles | 90.00, 99.60, 90.00 |
Refinement procedure
Resolution | 47.750 - 1.980 |
R-factor | 0.2017 |
Rwork | 0.200 |
R-free | 0.22570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8eqw |
RMSD bond length | 0.010 |
RMSD bond angle | 1.255 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.000 | 2.010 |
High resolution limit [Å] | 1.980 | 1.980 |
Number of reflections | 565830 | 28182 |
<I/σ(I)> | 16.1 | |
Completeness [%] | 99.8 | |
Redundancy | 7.1 | |
CC(1/2) | 0.965 | 0.755 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.1 M sodium malonate, pH 6.0, 25% PEG 3350, crystals soaked with 2 mM O-acetyl-L-homoserine for 5 min. |