8EOY
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI37
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-002 |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2021-04-24 |
Detector | Bruker PHOTON II |
Wavelength(s) | 1.54301 |
Spacegroup name | P 1 |
Unit cell lengths | 53.234, 60.751, 67.650 |
Unit cell angles | 91.08, 108.98, 107.79 |
Refinement procedure
Resolution | 24.930 - 2.280 |
R-factor | 0.2394 |
Rwork | 0.236 |
R-free | 0.29920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jpy |
RMSD bond length | 0.008 |
RMSD bond angle | 1.081 |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.930 | 9.070 |
High resolution limit [Å] | 2.270 | 2.340 |
Rmerge | 0.187 | |
Rmeas | 0.230 | |
Rpim | 0.131 | |
Number of reflections | 34334 | 14241 |
<I/σ(I)> | 5.7 | |
Completeness [%] | 97.9 | |
Redundancy | 1 | |
CC(1/2) | 0.300 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 0.2 M Ammonium phosphate dibasic, 17% w/v PEG3350, pH 8.0 |