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8EN3

Structure of GII.17 norovirus in complex with Nanobody 45

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL14-1
Synchrotron siteSSRL
BeamlineBL14-1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-22
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.9184
Spacegroup nameP 1 21 1
Unit cell lengths79.495, 71.306, 82.615
Unit cell angles90.00, 113.32, 90.00
Refinement procedure
Resolution44.530 - 2.100
R-factor0.2146
Rwork0.213
R-free0.26250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5f4o
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0006.2602.230
High resolution limit [Å]1.4004.4402.100
Rmerge0.1401.046
Rmeas0.1521.139
Number of reflections4964434057978
<I/σ(I)>4.911.731.54
Completeness [%]99.899.799.7
Redundancy6.1036.6466.378
CC(1/2)0.9740.9910.627
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291.15(1.6 M ammonium sulfate, 0.08 M sodium acetate, and 20% [v/v] glycerol)

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