8EM9
Human PU.1 ETS-Domain (165-270) Bound to d(AATAGGAGAAGTAGGG)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.920119 |
Spacegroup name | P 32 |
Unit cell lengths | 46.184, 46.184, 90.992 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 24.170 - 2.341 |
R-factor | 0.2272 |
Rwork | 0.223 |
R-free | 0.27020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8e3k |
RMSD bond length | 0.003 |
RMSD bond angle | 0.570 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.170 | 2.424 |
High resolution limit [Å] | 2.341 | 2.341 |
Rmerge | 0.097 | 0.843 |
Rmeas | 0.106 | 0.919 |
Rpim | 0.042 | 0.364 |
Number of reflections | 9146 | 942 |
<I/σ(I)> | 15.15 | 2.44 |
Completeness [%] | 99.6 | 99.79 |
Redundancy | 6.6 | 6.5 |
CC(1/2) | 0.995 | 0.893 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 100 mM Sodium Acetate, pH=4.6, 2% PEG 3350 |