8EGL
Crystal Structure of Guanylate kinase from Pseudomonas aeruginosa PAO1 in complex with GMP and ADP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E+ SUPERBRIGHT |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2022-01-18 |
| Detector | RIGAKU SATURN 944+ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 |
| Unit cell lengths | 72.280, 72.370, 144.730 |
| Unit cell angles | 81.60, 88.00, 60.00 |
Refinement procedure
| Resolution | 48.150 - 2.350 |
| R-factor | 0.1968 |
| Rwork | 0.196 |
| R-free | 0.22870 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7u5f GMP-bound structure |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.725 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1 4674) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.410 |
| High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
| Rmerge | 0.058 | 0.016 | 0.607 |
| Rmeas | 0.063 | 0.017 | 0.663 |
| Number of reflections | 103118 | 1138 | 7434 |
| <I/σ(I)> | 26.37 | 102.64 | 3.29 |
| Completeness [%] | 98.6 | 98.4 | 94.9 |
| Redundancy | 7.459 | 7.38 | 6.278 |
| CC(1/2) | 1.000 | 1.000 | 0.824 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 287 | RigakuReagents. JCSG+ screen, condition G7: 100mM succinic acid pH 7.0, 15% PEG 3350; PsaeA.01463.a.AE1.PW38943 at 20mg/ml + 5mM ATP + 5mM GMP + 5mM MgCl2; tray 320335g7; cryo: 20%EG; puck xhd7-11 |






