8EDB
5'-CGCGAATTCGCG-3' and an AT-specific binder (DB1884) complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-07 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 25.770, 39.760, 65.350 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.240 - 1.550 |
R-factor | 0.2012 |
Rwork | 0.200 |
R-free | 0.21570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | IBNA |
RMSD bond length | 0.013 |
RMSD bond angle | 1.521 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.240 | 1.600 |
High resolution limit [Å] | 1.550 | 1.550 |
Number of reflections | 10249 | 1004 |
<I/σ(I)> | 17.92 | |
Completeness [%] | 99.5 | |
Redundancy | 2 | |
CC(1/2) | 0.990 | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | MPD, SODIUM CACODYLATE TRIHYDRATE, SPERMINE TETRAHYDROCHLORIDE, POTASSIUM CHLORIDE, MAGNESIUM CHLORIDE HEXAHYDRATE |