8EBK
Crystal Structure Analysis of xHDMX in complex with the stapled peptide PROTAC analog
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-03-25 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9792 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 81.520, 108.400, 30.730 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 33.034 - 1.290 |
| R-factor | 0.1647 |
| Rwork | 0.164 |
| R-free | 0.18730 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6v4f |
| Data reduction software | XDS |
| Data scaling software | xia2 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 33.034 | 33.040 | 1.310 |
| High resolution limit [Å] | 1.290 | 3.500 | 1.290 |
| Rmeas | 0.054 | 0.029 | 1.683 |
| Rpim | 0.015 | 0.008 | 0.462 |
| Total number of observations | 22594 | 22433 | |
| Number of reflections | 34837 | 1894 | 1711 |
| <I/σ(I)> | 19.6 | 67.4 | 1.2 |
| Completeness [%] | 99.9 | 100 | 99.8 |
| Redundancy | 13.1 | 11.9 | 13.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 100mM BisTris pH 6.0, 14.4% PEG 3350, 30mM ammonium sulfate |






