Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8EB9

Crystal structure of SIX8 from Fusarium oxysporum f. sp. lycopersici

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-08-09
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.95373
Spacegroup nameP 43 2 2
Unit cell lengths51.814, 51.814, 81.599
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.640 - 1.280
R-factor0.1715
Rwork0.170
R-free0.19330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)SIX8 alphafold model
RMSD bond length0.011
RMSD bond angle1.210
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.6401.326
High resolution limit [Å]1.2801.280
Rmerge0.0481.350
Rmeas0.0501.405
Rpim0.014
Number of reflections294492869
<I/σ(I)>23.71
Completeness [%]100.099.1
Redundancy13
CC(1/2)0.9990.725
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.17 M Ammonium sulfate, 15% glycerol, 25.5% PEG4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon