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8E5I

Old Yellow Enzyme 1 (NpOYE1) from Neptuniibacter sp.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-06-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9537
Spacegroup nameP 43 21 2
Unit cell lengths95.298, 95.298, 87.602
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.650 - 1.700
R-factor0.1624
Rwork0.161
R-free0.19510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold
Data reduction softwareXDS
Data scaling softwareAimless (0.7.8)
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.65047.6501.730
High resolution limit [Å]1.7008.9901.700
Rmerge0.1570.0493.925
Rmeas0.1600.0514.002
Rpim0.0310.0100.774
Total number of observations1198035807961933
Number of reflections450933822356
<I/σ(I)>16.654.71.4
Completeness [%]100.099.599.6
Redundancy26.621.126.3
CC(1/2)0.9990.9990.517
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529120% PEG 3350, Bis-tris propane pH 6.5

219869

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