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8DZB

Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor 11

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-20
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameI 1 2 1
Unit cell lengths45.780, 52.550, 113.537
Unit cell angles90.00, 100.23, 90.00
Refinement procedure
Resolution47.600 - 1.850
R-factor0.1846
Rwork0.183
R-free0.20960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7rn1
RMSD bond length0.011
RMSD bond angle1.660
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Refinement softwareREFMAC (5.8.0266)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.60047.6001.890
High resolution limit [Å]1.8509.0601.850
Rmerge0.0870.0440.443
Rmeas0.1010.0510.520
Rpim0.0490.0250.266
Number of reflections214951881354
<I/σ(I)>9.8
Completeness [%]94.789.997.2
Redundancy3.73.63.7
CC(1/2)0.9940.9970.589
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29325% PEG 3350, 0.2 M AmSO4, 0.1 M HEPES 7.5

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