8DZB
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor 11
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-03-20 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1 |
| Spacegroup name | I 1 2 1 |
| Unit cell lengths | 45.780, 52.550, 113.537 |
| Unit cell angles | 90.00, 100.23, 90.00 |
Refinement procedure
| Resolution | 47.600 - 1.850 |
| R-factor | 0.1846 |
| Rwork | 0.183 |
| R-free | 0.20960 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7rn1 |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.660 |
| Data reduction software | iMOSFLM |
| Data scaling software | Aimless |
| Refinement software | REFMAC (5.8.0266) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.600 | 47.600 | 1.890 |
| High resolution limit [Å] | 1.850 | 9.060 | 1.850 |
| Rmerge | 0.087 | 0.044 | 0.443 |
| Rmeas | 0.101 | 0.051 | 0.520 |
| Rpim | 0.049 | 0.025 | 0.266 |
| Number of reflections | 21495 | 188 | 1354 |
| <I/σ(I)> | 9.8 | ||
| Completeness [%] | 94.7 | 89.9 | 97.2 |
| Redundancy | 3.7 | 3.6 | 3.7 |
| CC(1/2) | 0.994 | 0.997 | 0.589 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 25% PEG 3350, 0.2 M AmSO4, 0.1 M HEPES 7.5 |






