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8DXF

[C:Hg2+/Ag+:C--pH 9] Metal-mediated DNA base pair in tensegrity triangle in Ag+ and Hg2+ solution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2021-12-12
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)1.00743
Spacegroup nameH 3
Unit cell lengths105.914, 105.914, 92.512
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.570 - 4.290
R-factor0.2188
Rwork0.217
R-free0.23930
Structure solution methodSAD
RMSD bond length0.011
RMSD bond angle1.241
Data reduction softwareautoPROC
Data scaling softwareSTARANISO
Phasing softwareAutoSol
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]65.1404.820
High resolution limit [Å]4.2904.290
Number of reflections3722412
<I/σ(I)>10.9
Completeness [%]85.3
Redundancy9.4
CC(1/2)0.9990.256
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP929840 mM Tris, 125 mM Magnesium sulfate, 12 uM silver nitrate, 24 uM mercury chloride

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PDB entries from 2024-05-15

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