8DW8
Host-guest structure of BLMA2 partially bound to 5'-ATTAGTTATAACTAAT-3'
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-10-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97948 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 55.675, 145.846, 46.822 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.400 - 2.580 |
R-factor | 0.2239 |
Rwork | 0.221 |
R-free | 0.27550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ztw |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.690 |
High resolution limit [Å] | 2.580 | 5.600 | 2.600 |
Rmerge | 0.101 | 0.048 | 0.627 |
Number of reflections | 11646 | 1202 | 1154 |
<I/σ(I)> | 10 | ||
Completeness [%] | 95.2 | 89.2 | 97.3 |
Redundancy | 4.4 | 3.8 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | Crystals of the host-guest complex were obtained in 5 mM magnesium acetate, 50 mM ADA, pH 6.5, 9% PEG4000. To obtain complexes with BLM, crystals were soaked in well solutions containing 0.1 mM BLM followed by stabilization in 9% PEG4000, 5 mM magnesium acetate, 100 mM HEPES pH 8.0, 20% ethylene glycol, 0.25 mM BLM until unit cell changes correlating with binding of BLM were detected. |