Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8DW8

Host-guest structure of BLMA2 partially bound to 5'-ATTAGTTATAACTAAT-3'

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2009-10-01
DetectorADSC QUANTUM 315r
Wavelength(s)0.97948
Spacegroup nameP 21 21 2
Unit cell lengths55.675, 145.846, 46.822
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.400 - 2.580
R-factor0.2239
Rwork0.221
R-free0.27550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ztw
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.690
High resolution limit [Å]2.5805.6002.600
Rmerge0.1010.0480.627
Number of reflections1164612021154
<I/σ(I)>10
Completeness [%]95.289.297.3
Redundancy4.43.84.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293Crystals of the host-guest complex were obtained in 5 mM magnesium acetate, 50 mM ADA, pH 6.5, 9% PEG4000. To obtain complexes with BLM, crystals were soaked in well solutions containing 0.1 mM BLM followed by stabilization in 9% PEG4000, 5 mM magnesium acetate, 100 mM HEPES pH 8.0, 20% ethylene glycol, 0.25 mM BLM until unit cell changes correlating with binding of BLM were detected.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon