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8DSJ

Peptidylglycine alpha hydroxylating monooxygenase anaerobic

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-10-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.000
Spacegroup nameP 1
Unit cell lengths38.140, 53.263, 86.424
Unit cell angles84.85, 89.96, 78.50
Refinement procedure
Resolution37.400 - 2.800
R-factor0.2012
Rwork0.197
R-free0.27490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1phm
RMSD bond length0.006
RMSD bond angle1.472
Data reduction softwareXDS
Data scaling softwareAimless (0.7.7)
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]37.40010.0001.840
High resolution limit [Å]1.8008.0001.800
Rmerge0.1690.162
Rmeas0.172
Rpim0.057
Number of reflections570734852118
<I/σ(I)>3.6
Completeness [%]92.898.857.5
Redundancy7.98.84.8
CC(1/2)0.8550.9820.328
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.52981.5 uL of WT PHM protein at 17 mg/mL in 20 mM sodium phosphate, pH 7.5 was added to 1.5 uL of mother liquor solution containing 16-18% PEG 20K, 20-250 mM sodium citrate, and 2 mM CuSO4. Plates were sealed using transparent tape. Crystals were formed within one week, and these initial crystals were used to seed succeeding trays using the same crystal conditions. Seeding was performed using a Hampton Research seed bead and Hampton Research seeding tool. Initial crystals (5-7 crystals) were vortexed with seed beads for 30 seconds in 30 uL mother liquor, and streaked into a new drop using the seeding tool.

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PDB entries from 2024-05-15

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