8DQY
Structure of Rv0455c from Mycobacterium tuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 25.130, 58.557, 65.914 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.980 - 2.100 |
R-factor | 0.1676 |
Rwork | 0.165 |
R-free | 0.22650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ref |
RMSD bond length | 0.008 |
RMSD bond angle | 1.717 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.980 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.076 | 0.206 |
Rmeas | 0.089 | 0.259 |
Rpim | 0.046 | 0.153 |
Number of reflections | 6087 | 461 |
<I/σ(I)> | 14.1 | 5.9 |
Completeness [%] | 99.8 | 99.2 |
Redundancy | 6.3 | 4.7 |
CC(1/2) | 0.998 | 0.964 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.1 M BIS-TRIS pH 5.5, 25% w/v Polyethylene glycol 3,350 |