8DQQ
Crystal structure of Arabidopsis thaliana COSY in complex with scopoletin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-26 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.907, 58.771, 273.611 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 136.810 - 2.330 |
R-factor | 0.2556 |
Rwork | 0.253 |
R-free | 0.31170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8dqo |
RMSD bond length | 0.003 |
RMSD bond angle | 0.679 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 136.810 | 2.413 |
High resolution limit [Å] | 2.330 | 2.330 |
Rmerge | 0.712 | |
Rmeas | 1.000 | |
Rpim | 0.712 | |
Number of reflections | 40091 | 7339 |
<I/σ(I)> | 9.4 | 1 |
Completeness [%] | 97.4 | 92.2 |
Redundancy | 1.9 | |
CC(1/2) | 0.991 | 0.441 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298.15 | 50 mM calcium acetate, 0.1 M sodium cacodylate pH 6.5, 20% glycerol, 500 uM umbelliferone, 5 mg/mL protein |