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8DQM

Crystal structure of isoaspartyl aminopeptidase from Roseivivax halodurans DSM 15395

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08B1-1
Synchrotron siteCLSI
Beamline08B1-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-08-08
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.522
Spacegroup nameP 21 21 21
Unit cell lengths62.222, 154.593, 197.911
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution98.960 - 2.700
R-factor0.2445
Rwork0.243
R-free0.26790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold model
RMSD bond length0.013
RMSD bond angle1.797
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]98.9602.690
High resolution limit [Å]2.6002.600
Rmerge0.0350.156
Number of reflections596645893
<I/σ(I)>7.760.58
Completeness [%]99.9
Redundancy11.2
CC(1/2)0.9980.953
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.1 M bis-tris propane pH 8.5, 0.2 M disodium malonate and 25% PEG3350

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