8DQA
Structure of A. thaliana MIF/D-DT-like protein-3 (MDL3)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-06 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 1.0 |
Spacegroup name | I 2 3 |
Unit cell lengths | 89.499, 89.499, 89.499 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.750 - 2.000 |
R-factor | 0.1962 |
Rwork | 0.195 |
R-free | 0.22460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7mrv |
RMSD bond length | 0.002 |
RMSD bond angle | 0.481 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.18_3845: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.750 | 2.072 |
High resolution limit [Å] | 2.000 | 2.000 |
Number of reflections | 8229 | 804 |
<I/σ(I)> | 35.38 | 4.35 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.8 | 12.2 |
CC(1/2) | 1.000 | 0.923 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 50 mM MES, pH 6.0, 4% MPD, 0.2 M ammonium acetate, 30% PEG3350 |