8DP6
Crystal structure of Helicobacter pylori EgtU
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2021-06-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 168.463, 58.395, 61.886 |
Unit cell angles | 90.00, 109.54, 90.00 |
Refinement procedure
Resolution | 39.530 - 1.300 |
Rwork | 0.170 |
R-free | 0.18030 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | AutoSol |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.530 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rpim | 0.069 | 0.952 |
Number of reflections | 137306 | 13237 |
<I/σ(I)> | 8.4 | 2.1 |
Completeness [%] | 99.1 | 84.8 |
Redundancy | 4.5 | |
CC(1/2) | 0.994 | 0.324 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 291 | 0.3 M ammonium sulfate, 22% PEG4000, 0.2 M sodium acetate, pH 4.8 |