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8DOS

Crystal structure of Ferredoxin (flavodoxin):NADP(+) oxidoreductase from Klebsiella pneumoniae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-24
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.97949
Spacegroup nameP 1
Unit cell lengths47.240, 56.020, 56.110
Unit cell angles106.69, 97.49, 83.40
Refinement procedure
Resolution27.370 - 1.872
R-factor0.1723
Rwork0.171
R-free0.20380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)0.97949
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (0.97949)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]53.48153.4811.904
High resolution limit [Å]1.8725.0811.872
Rmerge0.0740.0310.326
Rmeas0.1020.0420.451
Rpim0.0700.0290.310
Total number of observations8282741153906
Number of reflections4213221252038
<I/σ(I)>7.919.92.2
Completeness [%]93.994.791.5
Redundancy21.91.9
CC(1/2)0.9940.9960.794
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5291Morpheus A9: 20% (v/v) PEG 500 MME, 10% (w/v) PEG 20000, 100 mM Tris/BICINE, 30 mM MgCl2 and 30 mM CaCl2, KlpnC.00101.a.B1.PS38694 at 21.7 mg/mL, Tray: plate 12372 well A9 dro 2, Puck: PSL1202, Cryo: DIRECT

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PDB entries from 2024-05-15

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