8DO5
Crystal structure of NahE in complex with intermediate (R)-4-hydroxy-4-(2-hydroxyphenyl)-2-iminobutanoate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9762 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 87.999, 87.999, 141.599 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.000 - 2.100 |
R-factor | 0.2054 |
Rwork | 0.202 |
R-free | 0.26370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SVT5 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.867 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.000 | 2.150 |
High resolution limit [Å] | 2.100 | 2.100 |
Rpim | 0.042 | 0.269 |
Number of reflections | 37736 | 2004 |
<I/σ(I)> | 20.6 | 2.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 10.8 | 11 |
CC(1/2) | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 23% PEG 2000 MME, 0.1 M MES (pH 8.0) |