8DKQ
Minimal PutA proline dehydrogenase domain (design #2) complexed with 2-(Furan-2-yl)acetic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 |
Unit cell lengths | 48.967, 55.291, 76.092 |
Unit cell angles | 104.07, 100.37, 108.67 |
Refinement procedure
Resolution | 49.580 - 1.720 |
R-factor | 0.1679 |
Rwork | 0.166 |
R-free | 0.19560 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 70.840 | 70.840 | 1.750 |
High resolution limit [Å] | 1.720 | 9.110 | 1.720 |
Rmerge | 0.083 | 0.050 | 0.362 |
Rmeas | 0.098 | 0.060 | 0.427 |
Rpim | 0.052 | 0.033 | 0.223 |
Total number of observations | 247327 | 1532 | 9214 |
Number of reflections | 68874 | 447 | 2745 |
<I/σ(I)> | 13.2 | 25.5 | 4.1 |
Completeness [%] | 92.3 | 88 | 69.2 |
Redundancy | 3.6 | 3.4 | 3.4 |
CC(1/2) | 0.992 | 0.987 | 0.884 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.05 - 0.2 M sodium formate and 19-24% (w/v) PEG 3350 |