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8DHI

Crystal Structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 8.5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]293
Detector technologyCCD
Collection date2021-06-18
DetectorRAYONIX MX300-HS
Wavelength(s)1.00000
Spacegroup nameP 1 21 1
Unit cell lengths71.250, 42.736, 86.859
Unit cell angles90.00, 106.53, 90.00
Refinement procedure
Resolution38.021 - 1.588
R-factor0.1753
Rwork0.174
R-free0.20420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ywf
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.620
High resolution limit [Å]1.5881.590
Rmerge0.0660.557
Rpim0.0400.354
Number of reflections679673352
<I/σ(I)>25.42
Completeness [%]99.9
Redundancy3.7
CC(1/2)0.9930.790
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52930.1M Tris, pH 8,.5, 0.2 M magnesium chloride, 25% (w/v) polyethylene glycol

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