8DB1
Crystal structure of native DMATS1 prenyltransferase
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-12-18 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 1 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 89.644, 107.211, 178.984 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 91.970 - 2.720 |
| R-factor | 0.2215 |
| Rwork | 0.220 |
| R-free | 0.24660 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | Alphafold |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.987 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 91.970 | 2.820 |
| High resolution limit [Å] | 2.720 | 2.720 |
| Rmerge | 0.147 | 1.290 |
| Rpim | 0.062 | 0.561 |
| Number of reflections | 46996 | 4548 |
| <I/σ(I)> | 10 | 1.6 |
| Completeness [%] | 99.7 | 99.8 |
| Redundancy | 6.6 | 6.3 |
| CC(1/2) | 0.995 | 0.514 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 294 | 7.5 mg/mL protein, 0.1 M Tris-HCl (pH 8.0), 0.7 M NaCl, 24% (v/v) PEG 3350 |






