8D9P
De Novo Photosynthetic Reaction Center Protein Equipped with Heme B and Mn(II) cations
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-09-23 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.54178 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 44.968, 44.968, 238.295 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.250 - 1.900 |
R-factor | 0.22014 |
Rwork | 0.219 |
R-free | 0.24336 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vjs |
RMSD bond length | 0.005 |
RMSD bond angle | 0.943 |
Data reduction software | XDS |
Data scaling software | XSCALE (VERSION January 10, 2014 BUILT=20140307) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.250 | 1.950 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.089 | |
Rmeas | 0.093 | |
Number of reflections | 20059 | 1271 |
<I/σ(I)> | 22.22 | 1.66 |
Completeness [%] | 98.4 | 86.6 |
Redundancy | 12.6 | |
CC(1/2) | 0.999 | 0.619 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.9 | 277 | 1.2 M Li2SO4, 0.5 M (NH4)2SO4, 150 mM Na citrate, pH 5.9 Cryoprotectant: 28% glycerol, 1.25 M Li2SO4, 0.5 M (NH4)2SO4, 100 mM Na citrate, pH 5.85 |