8D8P
Crystal structure of a novel fatty acid decarboxylase from Rothia nasimurium
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | LNLS SIRUS BEAMLINE MANACA |
| Synchrotron site | LNLS SIRUS |
| Beamline | MANACA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-11-19 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 1.4586 |
| Spacegroup name | F 2 2 2 |
| Unit cell lengths | 57.545, 203.380, 316.351 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.410 - 2.750 |
| R-factor | 0.2301 |
| Rwork | 0.228 |
| R-free | 0.26920 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1izo |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.831 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 49.020 | 2.920 |
| High resolution limit [Å] | 2.750 | 2.750 |
| Rmeas | 0.350 | |
| Number of reflections | 24500 | 3873 |
| <I/σ(I)> | 5.9 | 0.98 |
| Completeness [%] | 99.8 | 99.7 |
| Redundancy | 5.9 | |
| CC(1/2) | 0.980 | 0.500 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 25 % (w/v) PEG3500, 15% (w/v) 2-Methil-2,4-pentanediol, 0.1 M Imidazole (pH 6.5) and 0.2 M lithium sulfate |






