8D84
E. faecium MurAA in complex with UDP-N-acetylmuramic acid (UNAM) and a covalent adduct of PEP with Cys119
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-11-01 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97856 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 146.865, 168.376, 316.198 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.810 - 2.650 |
R-factor | 0.24195 |
Rwork | 0.241 |
R-free | 0.26067 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3r38 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.311 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0350) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.810 | 2.749 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.236 | 3.063 |
Number of reflections | 225455 | 22047 |
<I/σ(I)> | 11.32 | 0.93 |
Completeness [%] | 99.8 | |
Redundancy | 15.1 | |
CC(1/2) | 0.997 | 0.368 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 2.1 M DL-Malic acid pH 7.0 |