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8D84

E. faecium MurAA in complex with UDP-N-acetylmuramic acid (UNAM) and a covalent adduct of PEP with Cys119

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2018-11-01
DetectorRAYONIX MX-300
Wavelength(s)0.97856
Spacegroup nameP 2 21 21
Unit cell lengths146.865, 168.376, 316.198
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.810 - 2.650
R-factor0.24195
Rwork0.241
R-free0.26067
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3r38
RMSD bond length0.007
RMSD bond angle1.311
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0350)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.8102.749
High resolution limit [Å]2.6502.650
Rmerge0.2363.063
Number of reflections22545522047
<I/σ(I)>11.320.93
Completeness [%]99.8
Redundancy15.1
CC(1/2)0.9970.368
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2932.1 M DL-Malic acid pH 7.0

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PDB entries from 2024-05-15

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