Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8D6C

Crystal Structure of Human Myt1 Kinase domain Bounded with compound 28

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2021-12-05
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979100
Spacegroup nameP 1 21 1
Unit cell lengths51.640, 112.730, 72.660
Unit cell angles90.00, 110.42, 90.00
Refinement procedure
Resolution58.290 - 2.200
R-factor0.2426
Rwork0.241
R-free0.26740
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3p1a
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]58.29058.2902.330
High resolution limit [Å]2.1906.5502.190
Rmerge0.0710.0531.600
Rmeas0.0840.0631.877
Total number of observations138123
Number of reflections3939315036259
<I/σ(I)>7.3822.140.55
Completeness [%]98.797.597.4
Redundancy3.5063.3283.573
CC(1/2)0.9960.9940.554
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.252935.6 to 6.6 % PEG3350, 0.2 M Na2SO4, 0.1 M Tris-HCl and 10% EG

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon