8D28
Crystal structure of theophylline aptamer in complex with theophylline
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-05-05 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97648 |
Spacegroup name | P 1 |
Unit cell lengths | 23.074, 29.561, 80.397 |
Unit cell angles | 95.73, 90.09, 109.58 |
Refinement procedure
Resolution | 39.970 - 1.420 |
R-factor | 0.1755 |
Rwork | 0.174 |
R-free | 0.20840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1o15 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17_3644) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.970 | 1.470 |
High resolution limit [Å] | 1.420 | 1.420 |
Number of reflections | 35223 | 3451 |
<I/σ(I)> | 15.19 | |
Completeness [%] | 93.8 | 91.54 |
Redundancy | 2.1 | 2.1 |
CC(1/2) | 0.999 | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | sodium cacodylate, PEG 8000, 2-methyl-2,4-pentanediol |