8D0J
Apo Human SARM1 TIR domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2019-08-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.11584 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.080, 78.169, 116.137 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.610 - 1.940 |
R-factor | 0.181 |
Rwork | 0.177 |
R-free | 0.22690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Homology model |
RMSD bond length | 0.008 |
RMSD bond angle | 0.783 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.610 | 1.990 |
High resolution limit [Å] | 1.940 | 1.940 |
Rmerge | 0.138 | |
Rmeas | 0.150 | |
Rpim | 0.058 | |
Number of reflections | 23100 | 2248 |
<I/σ(I)> | 13.6 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.4 | 10.2 |
CC(1/2) | 0.998 | 0.682 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298.15 | 100 mM Bis-Tris propane pH 6.5, 200 mM potassium thiocyanate, and 15% polyethylene glycol 3350 |