8CXF
Crystal structure of an i-motif from the HRAS promoter region
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 196 |
Detector technology | PIXEL |
Collection date | 2021-07-08 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9196 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 118.392, 31.271, 54.279 |
Unit cell angles | 90.00, 92.93, 90.00 |
Refinement procedure
Resolution | 41.010 - 1.770 |
R-factor | 0.2226 |
Rwork | 0.221 |
R-free | 0.23700 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 0.943 |
Phasing software | PHENIX (1.18.2_3874) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.010 | 1.800 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.059 | 1.462 |
Rmeas | 0.062 | 1.596 |
Rpim | 0.020 | 0.625 |
Number of reflections | 19101 | 784 |
<I/σ(I)> | 16.6 | 0.9 |
Completeness [%] | 95.9 | 68.5 |
Redundancy | 9.6 | 6.1 |
CC(1/2) | 0.999 | 0.725 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 0.05 M MES, 17% w/v PEG 4000, X M Spermine Tetrahydrochloride (ADD SPERMINE CONCENTRATION) |