8CU9
Crystal Structure of Bifunctional protein GlmU from Klebsiella pneumoniae subsp. pneumoniae
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-F |
| Synchrotron site | APS |
| Beamline | 21-ID-F |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2021-11-11 |
| Detector | RAYONIX MX-300 |
| Wavelength(s) | 0.97872 |
| Spacegroup name | P 21 3 |
| Unit cell lengths | 139.150, 139.150, 139.150 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.200 - 2.650 |
| R-factor | 0.1715 |
| Rwork | 0.169 |
| R-free | 0.20430 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2oi6 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.881 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MoRDa |
| Refinement software | PHENIX (1.20.1-4487) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 49.200 | 49.200 | 2.720 |
| High resolution limit [Å] | 2.650 | 11.850 | 2.650 |
| Rmerge | 0.048 | 0.025 | 0.637 |
| Rmeas | 0.053 | 0.028 | 0.707 |
| Total number of observations | 137618 | ||
| Number of reflections | 26243 | 309 | 1941 |
| <I/σ(I)> | 21.81 | 48.69 | 2.83 |
| Completeness [%] | 99.4 | 91.7 | 100 |
| Redundancy | 5.244 | 4.505 | 5.308 |
| CC(1/2) | 0.999 | 0.998 | 0.819 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 287 | [[Target: KlpnC.00150.a.B1.PW38985] [crystallization: protein at 25.33 mg/mL was mixed 1:1 (0.2 uL protein and 0.2 uL precipitant) with an opt screen based on JCSG+ E1: 0.1 M sodium cacodylate, pH 6.5, 1.0 M tri-sodium citrate] [Barcode: 323500h2] [pin: hnx6-4] [cryo: 20% Ethylene glycol] |






