8CU5
Crystal Structure of Putative Cyclophilin B from Brugia malayi
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97740 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 137.220, 137.220, 143.260 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.510 - 1.850 |
R-factor | 0.1711 |
Rwork | 0.170 |
R-free | 0.19640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fru |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MoRDa |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.510 | 48.510 | 1.900 |
High resolution limit [Å] | 1.850 | 8.270 | 1.850 |
Rmerge | 0.044 | 0.014 | 0.608 |
Rmeas | 0.046 | 0.015 | 0.643 |
Total number of observations | 553484 | ||
Number of reflections | 58246 | 749 | 4231 |
<I/σ(I)> | 31.91 | 97.06 | 3.9 |
Completeness [%] | 100.0 | 98.9 | 100 |
Redundancy | 9.503 | 8.43 | 9.48 |
CC(1/2) | 1.000 | 1.000 | 0.931 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 287 | [Target: BrmaA.00538.a.B2.PD38321 - 20.5 mg/mL] [Barcode: 302391h9] [Pin: eko9-16] [Crystallization: sparse screen - JCSG+ H9 -100 mM Bis-Tris pH 5.5, 200 mM Lithium sulfate, 25% (w/v) PEG 3550, 14C, 0.4:0.4 drop ratio] [Cryo: 15% EG] |