8CQV
Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_3392)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.976200 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 64.894, 40.623, 75.497 |
Unit cell angles | 90.00, 100.00, 90.00 |
Refinement procedure
Resolution | 53.306 - 1.700 |
Rwork | 0.172 |
R-free | 0.20630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AF-Q8A2B3-F1 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.793 |
Data reduction software | XDS (Feb 5, 2021 (BUILT 20210323)) |
Data scaling software | Aimless (0.7.9) |
Phasing software | MOLREP (11.9.02) |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 74.350 | 74.350 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.106 | 0.047 | 1.556 |
Rmeas | 0.132 | 0.060 | 1.966 |
Rpim | 0.078 | 0.037 | 1.186 |
Number of reflections | 43098 | 333 | 2263 |
<I/σ(I)> | 8.8 | ||
Completeness [%] | 100.0 | ||
Redundancy | 5 | 4.4 | 4.7 |
CC(1/2) | 0.996 | 0.983 | 0.342 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 293 | Buffer system (Imidazol, MES) 20% v/v Ethylen glycol, 10% v/v PEG 8000, 0.12M Diethylene glycol, 0.12M Triethylene glycol, 0.12M Tetraethylene glycol, 0.12M Pentaethylene glycol |