8CEJ
Succinyl-CoA Reductase from Clostridium kluyveri (SucD) with Mesaconyl-C1-CoA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-05-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97630 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 141.890, 190.650, 190.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 - 2.100 |
R-factor | 0.2218 |
Rwork | 0.211 |
R-free | 0.24220 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.487 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 2.150 |
High resolution limit [Å] | 2.100 | 9.390 | 2.100 |
Rmerge | 0.115 | 0.049 | 0.643 |
Rmeas | 0.125 | 0.054 | 0.695 |
Number of reflections | 149464 | 1720 | 10976 |
<I/σ(I)> | 12.21 | ||
Completeness [%] | 99.9 | ||
Redundancy | 2 | ||
CC(1/2) | 0.997 | 0.998 | 0.927 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 288.15 | 100 mM magnesium acetate, 100 mM MOPS pH 7.5, 5 mM mesaconyl-CoA 12% PEG 8000 |