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8CDC

Native 3CLpro from SARS-CoV-2 at 1.54 A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-17
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.976240
Spacegroup nameC 1 2 1
Unit cell lengths114.063, 53.485, 44.624
Unit cell angles90.00, 103.00, 90.00
Refinement procedure
Resolution43.519 - 1.540
Rwork0.185
R-free0.23910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6yb7
RMSD bond length0.010
RMSD bond angle1.831
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0403)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.6001.570
High resolution limit [Å]1.5401.540
Rmerge0.0500.961
Rmeas0.0541.136
Rpim0.0300.621
Number of reflections388251885
<I/σ(I)>15.31.6
Completeness [%]100.0100
Redundancy6.6
CC(1/2)0.9990.758
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729320-60 mM ammonium acetate buffer at pH 7.0 and 20-30 % PEG4000 as a precipitant

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