8CB7
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tetrapeptide Glu-Val-Phe-Leu
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-26 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.620, 94.242, 101.549 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.700 - 2.850 |
R-factor | 0.2636 |
Rwork | 0.259 |
R-free | 0.30660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6hck |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.700 | 2.950 |
High resolution limit [Å] | 2.850 | 2.850 |
Rpim | 0.107 | 1.013 |
Number of reflections | 11417 | 1113 |
<I/σ(I)> | 7.7 | 1.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.6 | 9.1 |
CC(1/2) | 0.993 | 0.403 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | Protein: 3.1-6.6 mg mL-1, 20 mM NaP pH 6.5, 200 mM NaCl was mixed with peptides (0.5-2.5% DMSO, 1-4 mM DTT) in ratio 1:10. Well solution: 100 mM Nacitrate pH 5.1-5.7, 16-26% PEG4000. Dropsize 1:1 microL Cryoprotection: 35% PEG4000 |