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8CAK

Crystal structure of dehydrogenase domain of Cylindrospermum stagnale NADPH-Oxidase 5 (NOX5) in complex with M41

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-01
DetectorDECTRIS PILATUS3 2M
Wavelength(s)1.000002
Spacegroup nameP 3 2 1
Unit cell lengths127.476, 127.476, 71.944
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.750 - 2.670
R-factor0.2039
Rwork0.202
R-free0.24450
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.935
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.76047.7002.800
High resolution limit [Å]2.6708.0002.670
Rmerge0.1980.0451.800
Rmeas0.2070.0471.000
Rpim0.0610.0140.554
Number of reflections194175882463
<I/σ(I)>11.4
Completeness [%]99.699.497
Redundancy11.310.411.4
CC(1/2)0.9970.9990.625
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION82930.3 M diethylene glycol; 0.3 M triethylene glycol, 0.3 M tetraethylene glycol, 0.3 M pentaethylene glycol, Tris-HCl 0.1 M pH 8.0, 20% (v/v) ethylene glycol, 10% (w/v) PEG8000

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PDB entries from 2024-05-15

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