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8C8U

Priestia megaterium mupirocin-resistant isoleucyl-tRNA synthetase 2 complexed with mupirocin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-02
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.9999951402559115
Spacegroup nameP 21 21 2
Unit cell lengths89.580, 124.830, 114.460
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.230 - 1.901
R-factor0.1846
Rwork0.183
R-free0.22240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1jzs
RMSD bond length0.008
RMSD bond angle0.909
Data reduction softwareXDS (20190806)
Data scaling softwareXSCALE (20190806)
Phasing softwarePHASER (CCP4Interface 7.0.077)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2301.969
High resolution limit [Å]1.9011.901
Rmerge0.1302.579
Rmeas0.1352.681
Rpim0.0370.720
Number of reflections1013027452
<I/σ(I)>14.931.01
Completeness [%]90.674.27
Redundancy13.313.4
CC(1/2)0.9990.452
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52930.1-0.4 M Potassium tartrate 15-25 % (w/v) PEG3350 12.5 mM Hepes-KOH pH=7,5 at 20 oC 25 mM NaCl 5 mM lithium-mupirocin 8.25 mg/ml wt-HVGH-BmIleRS2

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PDB entries from 2024-05-15

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