8C4W
Crystal structure of rat autotaxin and compound MEY-002
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976254 |
Spacegroup name | P 1 |
Unit cell lengths | 53.228, 62.863, 70.151 |
Unit cell angles | 98.99, 106.57, 99.51 |
Refinement procedure
Resolution | 47.647 - 1.950 |
R-factor | 0.1969 |
Rwork | 0.196 |
R-free | 0.23570 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.994 |
Data reduction software | XDS (Feb 5, 2021 (BUILT 20210323)) |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER (Phaser-2.1.2) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.647 | 1.979 |
High resolution limit [Å] | 1.945 | 1.945 |
Number of reflections | 59934 | 3012 |
<I/σ(I)> | 9.3 | |
Completeness [%] | 97.2 | |
Redundancy | 3.3 | |
CC(1/2) | 0.996 | 0.509 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 293 | 18-22% (m/v) PEG3350, 0.1-0.3 M NH4I and 0.3 M NaSCN |