8C33
Anaerobic light exposed 2.25 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-08 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9765 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.918, 72.622, 200.943 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.930 - 2.250 |
R-factor | 0.20009 |
Rwork | 0.198 |
R-free | 0.24798 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8c31 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.867 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0403) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.920 | 2.290 |
High resolution limit [Å] | 2.250 | 2.250 |
Number of reflections | 43294 | 2075 |
<I/σ(I)> | 9.4 | 1.2 |
Completeness [%] | 100.0 | 98.4 |
Redundancy | 13.4 | 13.3 |
CC(1/2) | 1.000 | 0.700 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | Condition B3 from Morpheus screen (Molecular Dimensions) (0.09 M halogens, 0.1 M buffer system 1 pH 6.5, 30% v/v precipitant mix 3 dark adapted crystals were exposed to light under anaerobic conditions inside a glove box for 30-40 secs |