8BZ8

Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SOLEIL BEAMLINE PROXIMA 2
Synchrotron site	SOLEIL
Beamline	PROXIMA 2
Temperature [K]	100
Detector technology	PIXEL
Collection date	2021-04-16
Detector	DECTRIS EIGER X 9M
Wavelength(s)	0.979415
Spacegroup name	P 1 21 1
Unit cell lengths	87.397, 292.381, 93.075
Unit cell angles	90.00, 100.50, 90.00

Refinement procedure

Resolution	45.760 - 2.520
R-factor	0.1926
Rwork	0.191
R-free	0.22800
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	8bz4
RMSD bond length	0.002
RMSD bond angle	0.470
Data reduction software	XDS
Data scaling software	XDS
Phasing software	PHASER
Refinement software	PHENIX (1.19.2_4158)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	49.280	2.560
High resolution limit [Å]	2.520	2.520
Rmerge	0.113	1.394
Rmeas	0.122	1.503
Rpim	0.046	0.558
Number of reflections	154021	7618
<I/σ(I)>	12.9	1.6
Completeness [%]	100.0	100
Redundancy	7.1	7.1
CC(1/2)	0.998	0.568

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP		293	0.1 M Bis-Tris propane pH 7.0 0.2 M Potassium sodium tartrate tetrahydrate 22.5% (w/v) PEG 3,350