8BVB
Crystal structure of the apo form of SmbA loop deletion mutant.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-31 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97319 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.375, 208.105, 64.234 |
Unit cell angles | 90.00, 117.58, 90.00 |
Refinement procedure
Resolution | 56.940 - 1.800 |
R-factor | 0.1706 |
Rwork | 0.169 |
R-free | 0.20310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6gs8 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.051 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.940 | 1.864 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.075 | 0.555 |
Rmeas | 0.090 | 0.664 |
Rpim | 0.049 | 0.361 |
Number of reflections | 128620 | 12871 |
<I/σ(I)> | 12.06 | 2.86 |
Completeness [%] | 97.8 | 97.84 |
Redundancy | 3.3 | 3.3 |
CC(1/2) | 0.996 | 0.763 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 303 | 200 mM NaCl and 10 % v/w PEG 6000 |