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8BV3

Bacillus subtilis DnaA domain III structure

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-25
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.99987
Spacegroup nameP 32
Unit cell lengths81.578, 81.578, 223.196
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution74.399 - 2.380
R-factor0.1931
Rwork0.191
R-free0.23870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1l8q
Data reduction softwareautoPROC (1.0.5 (20211020))
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]74.3992.520
High resolution limit [Å]2.3802.380
Rmerge0.1791.461
Rmeas0.1891.583
Rpim0.0600.599
Number of reflections567432842
<I/σ(I)>10.11.5
Completeness [%]85.327.2
Redundancy9.76.7
CC(1/2)0.9960.461
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION293.15Morpheus H3: 0.02 M DL-Glutamic acid monohydrate, 0.02 M DL-Alanine, 0.0 2M Glycine, 0.2M DL-Lysine monohydrochloride, 0.02M DL-Serine, 0.1 M Imidazole/ MES monohydrate pH 6.5, 20% v/v Glycerol, 20% w/v PEG 4000

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PDB entries from 2024-05-15

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