8BUP
Structure of DDB1 bound to DS30-engaged CDK12-cyclin K
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-21 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 248.058, 248.058, 221.169 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 57.530 - 3.410 |
R-factor | 0.2014 |
Rwork | 0.200 |
R-free | 0.22280 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.877 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 214.825 | 3.586 |
High resolution limit [Å] | 3.408 | 3.408 |
Number of reflections | 92873 | 4648 |
<I/σ(I)> | 13.6 | |
Completeness [%] | 96.0 | |
Redundancy | 21 | |
CC(1/2) | 0.999 | 0.372 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.44 M ammonium sulphate, 2.143 %v/v PEG 200, 0.07 M HEPES pH 7.5 |