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8BR1

ExoY Nucleotidyl Cyclase domain from Vibrio nigripulchritudo MARTX toxin, bound to Latrunculin-B-ATP-Mg-actin, and 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE and 2 Mg ions

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-26
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9786
Spacegroup nameP 1 21 1
Unit cell lengths76.116, 132.443, 96.396
Unit cell angles90.00, 110.57, 90.00
Refinement procedure
Resolution47.760 - 2.044
R-factor0.1916
Rwork0.190
R-free0.22210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2pav
RMSD bond length0.008
RMSD bond angle0.930
Data reduction softwareXDS (VERSION Feb 5, 2021 BUILT=20210323)
Data scaling softwareAimless (Version 0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwareBUSTER (2.10.3 (20-MAY-2020))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.7602.210
High resolution limit [Å]2.0442.044
Rmerge0.1623.852
Number of reflections864954319
<I/σ(I)>14.1
Completeness [%]84.328.5
Redundancy32.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529326 % peg 3350, 26 % Glycerol, 30 mM LiSO4, 0.1M TrisHCl pH8.5, 3 % Dioxane,

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