8BOC
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 19
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-17 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 33.700, 71.720, 123.640 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.730 - 1.900 |
R-factor | 0.2479 |
Rwork | 0.246 |
R-free | 0.28560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ia5 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.750 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.830 | 2.020 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmeas | 0.173 | |
Number of reflections | 24427 | 3854 |
<I/σ(I)> | 11.53 | 1.05 |
Completeness [%] | 99.8 | |
Redundancy | 12.58 | |
CC(1/2) | 0.999 | 0.633 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 37,5 % MPD_PEG 1000_PEG 3350, 175 mM Morpheus Carboxylic acids Mix, 100 mM Sodium citrate tribasic dihydrate, 100 mM Morpheus Buffer System 3 pH 8.5 |