8BLV
The PDZ domains of human SDCBP with a bound SDC4 C-terminal peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-21 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.710, 67.462, 106.740 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.027 - 1.500 |
Rwork | 0.182 |
R-free | 0.22200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1n99 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.729 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 106.740 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rpim | 0.033 | 2.217 |
Number of reflections | 66371 | 3237 |
<I/σ(I)> | 15.2 | 0.6 |
Completeness [%] | 100.0 | |
Redundancy | 79.2 | |
CC(1/2) | 0.999 | 0.658 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 293 | 200 mM sodium sulphate, 100 mM bis-tris-propane, 10% ethylene glycol, 20% PEG 3350 |