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8BLV

The PDZ domains of human SDCBP with a bound SDC4 C-terminal peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-21
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9763
Spacegroup nameP 21 21 21
Unit cell lengths56.710, 67.462, 106.740
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution57.027 - 1.500
Rwork0.182
R-free0.22200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1n99
RMSD bond length0.013
RMSD bond angle1.729
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0352)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]106.7401.530
High resolution limit [Å]1.5001.500
Rpim0.0332.217
Number of reflections663713237
<I/σ(I)>15.20.6
Completeness [%]100.0
Redundancy79.2
CC(1/2)0.9990.658
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.3293200 mM sodium sulphate, 100 mM bis-tris-propane, 10% ethylene glycol, 20% PEG 3350

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PDB entries from 2024-05-15

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