8BFT
The E. coli TrpD2 protein YbiB in complex with a C-terminal peptide from ObgE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97856 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 133.469, 63.895, 47.416 |
Unit cell angles | 90.00, 97.35, 90.00 |
Refinement procedure
Resolution | 47.030 - 1.190 |
R-factor | 0.1382 |
Rwork | 0.137 |
R-free | 0.16680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8bfr |
RMSD bond length | 0.009 |
RMSD bond angle | 1.051 |
Data reduction software | autoPROC (1.0.5) |
Data scaling software | autoPROC (1.0.5) |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.030 | 1.331 |
High resolution limit [Å] | 1.190 | 1.192 |
Number of reflections | 87511 | 4374 |
<I/σ(I)> | 9.4 | |
Completeness [%] | 92.8 | |
Redundancy | 6.8 | |
CC(1/2) | 0.997 | 0.696 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M Citrate pH 5, 20% w/v PEG6000 |