8BCS
X-ray crystal structure of a de novo designed helix-loop-helix homodimer in an anti arrangement, CC-HP1.0
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-12 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 36.438, 36.438, 59.329 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.560 - 2.100 |
R-factor | 0.2396 |
Rwork | 0.237 |
R-free | 0.26450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6q5s |
RMSD bond length | 0.008 |
RMSD bond angle | 0.988 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.560 | 31.560 | 2.020 |
High resolution limit [Å] | 1.990 | 5.390 | 1.990 |
Rmeas | 0.038 | 0.024 | 1.813 |
Number of reflections | 3400 | 204 | 161 |
<I/σ(I)> | 27 | 70.9 | 1.1 |
Completeness [%] | 100.0 | 97.6 | |
Redundancy | 16.5 | 8.7 | |
CC(1/2) | 1.000 | 1.000 | 0.600 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.2 M sodium acetate trihydrate, 0.1 M sodium cacodylate, 30% w/v PEG 8000, pH 6.5 |