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8BAL

Niako3494, a bacterial protein structure in glycoside hydrolase family 20

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2022-04-29
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9762
Spacegroup nameC 2 2 21
Unit cell lengths146.987, 254.589, 139.580
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution73.490 - 2.270
Rwork0.283
R-free0.35610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold
RMSD bond length0.007
RMSD bond angle1.613
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0352)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]73.4902.310
High resolution limit [Å]2.2702.270
Number of reflections1204425852
<I/σ(I)>6.31.1
Completeness [%]99.999.1
Redundancy13.913.6
CC(1/2)0.9580.336
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Protein stock at 18mg/mL, in the precipitant: 0.1 M MMT buffer (DL-Malic acid, MES monohydrate, Tris base [ratio 1:2:2]), pH 6.0, 25 % w/v PEG 1500, protein to precipitant ratio 1:1, 1 uL drop size, +50 nL 1:10000 diluted seed stock. Cryoprotectant used was made up with 20% PEG400 in 80% mother liquor.

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